Cluster: HRGMv2_2908_CGC28
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_2908
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2908_17 | HRGMv2_2908_17_9 | 10716 | 11606 | - | 3.A.1.1.29 |
| TC | HRGMv2_2908_17 | HRGMv2_2908_17_10 | 11621 | 12556 | - | 3.A.1.1.10 |
| STP | HRGMv2_2908_17 | HRGMv2_2908_17_11 | 12869 | 14629 | + | HATPase_c |
| TF | HRGMv2_2908_17 | HRGMv2_2908_17_12 | 14593 | 15660 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2908_17 | HRGMv2_2908_17_13 | 15783 | 17153 | - | GH28 |
| CAZyme | HRGMv2_2908_17 | HRGMv2_2908_17_14 | 17330 | 19429 | - | GH51_1 |
| CAZyme | HRGMv2_2908_17 | HRGMv2_2908_17_15 | 19700 | 20857 | - | GH109 |
| TF | HRGMv2_2908_17 | HRGMv2_2908_17_16 | 21036 | 21860 | + | HTH_AraC |
| CAZyme | HRGMv2_2908_17 | HRGMv2_2908_17_17 | 21901 | 23196 | - | GT76 |
| TC | HRGMv2_2908_17 | HRGMv2_2908_17_18 | 24143 | 24784 | - | 2.A.115.1.2 |
| TF | HRGMv2_2908_17 | HRGMv2_2908_17_19 | 24860 | 25693 | + | MerR |
| CAZyme | HRGMv2_2908_17 | HRGMv2_2908_17_20 | 25895 | 27463 | - | CE20 |
| CAZyme | HRGMv2_2908_17 | HRGMv2_2908_17_21 | 27581 | 30019 | - | GH3 |
Gene ID: HRGMv2_2908_17_9
Type: TC
Location: 10716 - 11606 (-)
Type: TC
Location: 10716 - 11606 (-)
Gene ID: HRGMv2_2908_17_10
Type: TC
Location: 11621 - 12556 (-)
Type: TC
Location: 11621 - 12556 (-)
Gene ID: HRGMv2_2908_17_11
Type: STP
Location: 12869 - 14629 (+)
Type: STP
Location: 12869 - 14629 (+)
Gene ID: HRGMv2_2908_17_12
Type: TF
Location: 14593 - 15660 (-)
Type: TF
Location: 14593 - 15660 (-)
Gene ID: HRGMv2_2908_17_13
Type: CAZyme
Location: 15783 - 17153 (-)
Type: CAZyme
Location: 15783 - 17153 (-)
Gene ID: HRGMv2_2908_17_14
Type: CAZyme
Location: 17330 - 19429 (-)
Type: CAZyme
Location: 17330 - 19429 (-)
Gene ID: HRGMv2_2908_17_15
Type: CAZyme
Location: 19700 - 20857 (-)
Type: CAZyme
Location: 19700 - 20857 (-)
Gene ID: HRGMv2_2908_17_16
Type: TF
Location: 21036 - 21860 (+)
Type: TF
Location: 21036 - 21860 (+)
Gene ID: HRGMv2_2908_17_17
Type: CAZyme
Location: 21901 - 23196 (-)
Type: CAZyme
Location: 21901 - 23196 (-)
Gene ID: HRGMv2_2908_17_18
Type: TC
Location: 24143 - 24784 (-)
Type: TC
Location: 24143 - 24784 (-)
Gene ID: HRGMv2_2908_17_19
Type: TF
Location: 24860 - 25693 (+)
Type: TF
Location: 24860 - 25693 (+)
Gene ID: HRGMv2_2908_17_20
Type: CAZyme
Location: 25895 - 27463 (-)
Type: CAZyme
Location: 25895 - 27463 (-)
Gene ID: HRGMv2_2908_17_21
Type: CAZyme
Location: 27581 - 30019 (-)
Type: CAZyme
Location: 27581 - 30019 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter sp900548545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.