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Cluster: HRGMv2_2908_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2908_1 HRGMv2_2908_1_261 288695 289654 - 8.A.5.1.4
TF HRGMv2_2908_1 HRGMv2_2908_1_262 289707 291191 - HTH_AraC | HTH_AraC
TC HRGMv2_2908_1 HRGMv2_2908_1_263 291298 293004 - 8.A.59.2.1
NULL(UNKNOWN) HRGMv2_2908_1 HRGMv2_2908_1_264 293180 294658 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2908_1 HRGMv2_2908_1_265 294802 295572 - ThuA
CAZyme HRGMv2_2908_1 HRGMv2_2908_1_266 295602 296678 - GH179
STP HRGMv2_2908_1 HRGMv2_2908_1_267 296813 298489 - SBP_bac_1
TC HRGMv2_2908_1 HRGMv2_2908_1_268 298582 299487 - 3.A.1.1.29
TC HRGMv2_2908_1 HRGMv2_2908_1_269 299535 300500 - 3.A.1.1.10
Gene ID: HRGMv2_2908_1_261
Type: TC
Location: 288695 - 289654 (-)
Gene ID: HRGMv2_2908_1_262
Type: TF
Location: 289707 - 291191 (-)
Gene ID: HRGMv2_2908_1_263
Type: TC
Location: 291298 - 293004 (-)
Gene ID: HRGMv2_2908_1_264
Type:
Location: 293180 - 294658 (+)
Gene ID: HRGMv2_2908_1_265
Type: pfam
Location: 294802 - 295572 (-)
Gene ID: HRGMv2_2908_1_266
Type: CAZyme
Location: 295602 - 296678 (-)
Gene ID: HRGMv2_2908_1_267
Type: STP
Location: 296813 - 298489 (-)
Gene ID: HRGMv2_2908_1_268
Type: TC
Location: 298582 - 299487 (-)
Gene ID: HRGMv2_2908_1_269
Type: TC
Location: 299535 - 300500 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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