Cluster: HRGMv2_2908_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2908
- CGC Family ID: CGCFAM_00231
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2908_5 | HRGMv2_2908_5_46 | 51409 | 51774 | + | 3.B.1.1.2 |
| TC | HRGMv2_2908_5 | HRGMv2_2908_5_47 | 51831 | 53000 | + | 3.B.1.1.3 |
| TC | HRGMv2_2908_5 | HRGMv2_2908_5_48 | 53046 | 54497 | + | 3.B.1.1.6 |
| pfam | HRGMv2_2908_5 | HRGMv2_2908_5_49 | 54676 | 55200 | + | DUF308 | DUF308 | DUF308 |
| pfam | HRGMv2_2908_5 | HRGMv2_2908_5_50 | 55308 | 56015 | - | DNA_alkylation |
| CAZyme | HRGMv2_2908_5 | HRGMv2_2908_5_51 | 56012 | 57133 | - | GT28 |
Gene ID: HRGMv2_2908_5_46
Type: TC
Location: 51409 - 51774 (+)
Type: TC
Location: 51409 - 51774 (+)
Gene ID: HRGMv2_2908_5_47
Type: TC
Location: 51831 - 53000 (+)
Type: TC
Location: 51831 - 53000 (+)
Gene ID: HRGMv2_2908_5_48
Type: TC
Location: 53046 - 54497 (+)
Type: TC
Location: 53046 - 54497 (+)
Gene ID: HRGMv2_2908_5_49
Type: pfam
Location: 54676 - 55200 (+)
Type: pfam
Location: 54676 - 55200 (+)
Gene ID: HRGMv2_2908_5_50
Type: pfam
Location: 55308 - 56015 (-)
Type: pfam
Location: 55308 - 56015 (-)
Gene ID: HRGMv2_2908_5_51
Type: CAZyme
Location: 56012 - 57133 (-)
Type: CAZyme
Location: 56012 - 57133 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter sp900548545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2908_5_46 | vegetarian > vegan | 1.11244 | 0.00385 |
| HRGMv2_2908_5_48 | vegetarian > vegan | 1.13512 | 0.00385 |