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Cluster: HRGMv2_2908_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2908_4 HRGMv2_2908_4_163 172051 172770 - GT51
pfam HRGMv2_2908_4 HRGMv2_2908_4_164 172857 173627 - H2O2_YaaD
pfam HRGMv2_2908_4 HRGMv2_2908_4_165 173640 174020 - DUF3783
TC HRGMv2_2908_4 HRGMv2_2908_4_166 174177 175517 + 5.A.1.2.7
TF HRGMv2_2908_4 HRGMv2_2908_4_167 175588 175977 + Fe_dep_repress
TC HRGMv2_2908_4 HRGMv2_2908_4_168 176098 177486 - 2.A.38.4.3
TC HRGMv2_2908_4 HRGMv2_2908_4_169 177534 178070 - 2.A.88.9.2
Gene ID: HRGMv2_2908_4_163
Type: CAZyme
Location: 172051 - 172770 (-)
Gene ID: HRGMv2_2908_4_164
Type: pfam
Location: 172857 - 173627 (-)
Gene ID: HRGMv2_2908_4_165
Type: pfam
Location: 173640 - 174020 (-)
Gene ID: HRGMv2_2908_4_166
Type: TC
Location: 174177 - 175517 (+)
Gene ID: HRGMv2_2908_4_167
Type: TF
Location: 175588 - 175977 (+)
Gene ID: HRGMv2_2908_4_168
Type: TC
Location: 176098 - 177486 (-)
Gene ID: HRGMv2_2908_4_169
Type: TC
Location: 177534 - 178070 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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