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Cluster: HRGMv2_2908_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2908_3 HRGMv2_2908_3_89 108743 111820 - GT39
CAZyme HRGMv2_2908_3 HRGMv2_2908_3_90 111984 114986 + GH2
TC HRGMv2_2908_3 HRGMv2_2908_3_91 115148 115933 - 3.D.6.1.3
TC HRGMv2_2908_3 HRGMv2_2908_3_92 115946 116563 - 3.D.6.1.2
TC HRGMv2_2908_3 HRGMv2_2908_3_93 116563 117261 - 3.D.6.1.2
TC HRGMv2_2908_3 HRGMv2_2908_3_94 117264 117818 - 3.D.6.1.2
TC HRGMv2_2908_3 HRGMv2_2908_3_95 117808 118773 - 3.D.6.1.2
TC HRGMv2_2908_3 HRGMv2_2908_3_96 118774 120120 - 3.D.6.1.2
Gene ID: HRGMv2_2908_3_89
Type: CAZyme
Location: 108743 - 111820 (-)
Gene ID: HRGMv2_2908_3_90
Type: CAZyme
Location: 111984 - 114986 (+)
Gene ID: HRGMv2_2908_3_91
Type: TC
Location: 115148 - 115933 (-)
Gene ID: HRGMv2_2908_3_92
Type: TC
Location: 115946 - 116563 (-)
Gene ID: HRGMv2_2908_3_93
Type: TC
Location: 116563 - 117261 (-)
Gene ID: HRGMv2_2908_3_94
Type: TC
Location: 117264 - 117818 (-)
Gene ID: HRGMv2_2908_3_95
Type: TC
Location: 117808 - 118773 (-)
Gene ID: HRGMv2_2908_3_96
Type: TC
Location: 118774 - 120120 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2908_3_91 vegetarian > vegan 1.01908 0.00385

🧭 Explore Read Mapping of CGC

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