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Cluster: HRGMv2_2907_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2907_12 HRGMv2_2907_12_29 37866 39017 + GT28
TC HRGMv2_2907_12 HRGMv2_2907_12_30 39284 41554 + 3.A.1.135.5
pfam HRGMv2_2907_12 HRGMv2_2907_12_31 41556 42044 + DUF1854
pfam HRGMv2_2907_12 HRGMv2_2907_12_32 42063 42389 + CdAMP_rec
TC HRGMv2_2907_12 HRGMv2_2907_12_33 42555 44333 - 2.A.35.2.1
TC HRGMv2_2907_12 HRGMv2_2907_12_34 44380 45135 - 3.A.1.3.20
TC HRGMv2_2907_12 HRGMv2_2907_12_35 45139 45903 - 3.A.1.3.20
TC HRGMv2_2907_12 HRGMv2_2907_12_36 45964 46836 - 3.A.1.3.20
Gene ID: HRGMv2_2907_12_29
Type: CAZyme
Location: 37866 - 39017 (+)
Gene ID: HRGMv2_2907_12_30
Type: TC
Location: 39284 - 41554 (+)
Gene ID: HRGMv2_2907_12_31
Type: pfam
Location: 41556 - 42044 (+)
Gene ID: HRGMv2_2907_12_32
Type: pfam
Location: 42063 - 42389 (+)
Gene ID: HRGMv2_2907_12_33
Type: TC
Location: 42555 - 44333 (-)
Gene ID: HRGMv2_2907_12_34
Type: TC
Location: 44380 - 45135 (-)
Gene ID: HRGMv2_2907_12_35
Type: TC
Location: 45139 - 45903 (-)
Gene ID: HRGMv2_2907_12_36
Type: TC
Location: 45964 - 46836 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS902
→
Species
UMGS902 sp934474225

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2907_12_35 vegetarian > vegan 1.45426 0.00141

🧭 Explore Read Mapping of CGC

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