Cluster: HRGMv2_2907_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2907
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2907_11 | HRGMv2_2907_11_18 | 26592 | 27557 | + | GH179 |
| pfam | HRGMv2_2907_11 | HRGMv2_2907_11_19 | 27566 | 28768 | + | GFO_IDH_MocA | GFO_IDH_MocA_C |
| pfam | HRGMv2_2907_11 | HRGMv2_2907_11_20 | 29000 | 29419 | - | PCC |
| TC | HRGMv2_2907_11 | HRGMv2_2907_11_21 | 30041 | 31579 | + | 2.A.14.1.3 |
Gene ID: HRGMv2_2907_11_18
Type: CAZyme
Location: 26592 - 27557 (+)
Type: CAZyme
Location: 26592 - 27557 (+)
Gene ID: HRGMv2_2907_11_19
Type: pfam
Location: 27566 - 28768 (+)
Type: pfam
Location: 27566 - 28768 (+)
Gene ID: HRGMv2_2907_11_20
Type: pfam
Location: 29000 - 29419 (-)
Type: pfam
Location: 29000 - 29419 (-)
Gene ID: HRGMv2_2907_11_21
Type: TC
Location: 30041 - 31579 (+)
Type: TC
Location: 30041 - 31579 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS902
Species
UMGS902 sp934474225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2907_11_20 | vegetarian > omnivore | 1.15106 | 0.01287 |
| HRGMv2_2907_11_20 | vegetarian > vegan | 1.11877 | 0.00141 |
| HRGMv2_2907_11_21 | vegetarian > vegan | 1.54172 | 0.00141 |