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Cluster: HRGMv2_2907_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2907_11 HRGMv2_2907_11_5 2185 2808 + 2.A.115.2.14
STP HRGMv2_2907_11 HRGMv2_2907_11_6 2818 3396 + NUDIX
pfam HRGMv2_2907_11 HRGMv2_2907_11_7 3434 3868 + YpsA
CAZyme HRGMv2_2907_11 HRGMv2_2907_11_8 4082 6901 + GH31
CAZyme HRGMv2_2907_11 HRGMv2_2907_11_9 7319 10138 + GH31
CAZyme HRGMv2_2907_11 HRGMv2_2907_11_10 10308 13106 + GH31
pfam HRGMv2_2907_11 HRGMv2_2907_11_11 13627 16101 + Dockerin_1 | LRR_5 | DUF6273
TF HRGMv2_2907_11 HRGMv2_2907_11_12 16392 17159 - 0035607 | 0036286
CAZyme HRGMv2_2907_11 HRGMv2_2907_11_13 17297 20878 + GH31
CAZyme HRGMv2_2907_11 HRGMv2_2907_11_14 21099 23471 + GH31_15
Gene ID: HRGMv2_2907_11_5
Type: TC
Location: 2185 - 2808 (+)
Gene ID: HRGMv2_2907_11_6
Type: STP
Location: 2818 - 3396 (+)
Gene ID: HRGMv2_2907_11_7
Type: pfam
Location: 3434 - 3868 (+)
Gene ID: HRGMv2_2907_11_8
Type: CAZyme
Location: 4082 - 6901 (+)
Gene ID: HRGMv2_2907_11_9
Type: CAZyme
Location: 7319 - 10138 (+)
Gene ID: HRGMv2_2907_11_10
Type: CAZyme
Location: 10308 - 13106 (+)
Gene ID: HRGMv2_2907_11_11
Type: pfam
Location: 13627 - 16101 (+)
Gene ID: HRGMv2_2907_11_12
Type: TF
Location: 16392 - 17159 (-)
Gene ID: HRGMv2_2907_11_13
Type: CAZyme
Location: 17297 - 20878 (+)
Gene ID: HRGMv2_2907_11_14
Type: CAZyme
Location: 21099 - 23471 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS902
→
Species
UMGS902 sp934474225

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2907_11_7 vegetarian > omnivore 2.44548 0.01287
HRGMv2_2907_11_7 vegetarian > vegan 3.46802 0.00141

🧭 Explore Read Mapping of CGC

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