Cluster: HRGMv2_2907_CGC5
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2907
- CGC Family ID: CGCFAM_03843
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2907_6 | HRGMv2_2907_6_14 | 14295 | 15008 | - | GT2 |
| pfam | HRGMv2_2907_6 | HRGMv2_2907_6_15 | 15009 | 15842 | - | Ubie_methyltran | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 | Zn_ribbon_RlmA |
| STP | HRGMv2_2907_6 | HRGMv2_2907_6_16 | 15945 | 16214 | + | FeoA |
| TC | HRGMv2_2907_6 | HRGMv2_2907_6_17 | 16159 | 17883 | + | 9.A.8.1.11 |
| pfam | HRGMv2_2907_6 | HRGMv2_2907_6_18 | 18201 | 19136 | - | 3HCDH | 3HCDH_N | NAD_binding_2 |
| pfam | HRGMv2_2907_6 | HRGMv2_2907_6_19 | 19316 | 20323 | + | AsnA |
| TC | HRGMv2_2907_6 | HRGMv2_2907_6_20 | 20649 | 21656 | + | 3.A.1.24.2 |
| TC | HRGMv2_2907_6 | HRGMv2_2907_6_21 | 21646 | 22311 | + | 3.A.1.24.5 |
| TC | HRGMv2_2907_6 | HRGMv2_2907_6_22 | 22366 | 23175 | + | 3.A.1.24.5 |
| STP | HRGMv2_2907_6 | HRGMv2_2907_6_23 | 23551 | 24111 | - | TetR_N |
| TC | HRGMv2_2907_6 | HRGMv2_2907_6_24 | 24273 | 25931 | + | 2.A.1.42.2 |
| TC | HRGMv2_2907_6 | HRGMv2_2907_6_25 | 26003 | 26635 | - | 1.A.62.2.1 |
Gene ID: HRGMv2_2907_6_14
Type: CAZyme
Location: 14295 - 15008 (-)
Type: CAZyme
Location: 14295 - 15008 (-)
Gene ID: HRGMv2_2907_6_15
Type: pfam
Location: 15009 - 15842 (-)
Type: pfam
Location: 15009 - 15842 (-)
Gene ID: HRGMv2_2907_6_16
Type: STP
Location: 15945 - 16214 (+)
Type: STP
Location: 15945 - 16214 (+)
Gene ID: HRGMv2_2907_6_17
Type: TC
Location: 16159 - 17883 (+)
Type: TC
Location: 16159 - 17883 (+)
Gene ID: HRGMv2_2907_6_18
Type: pfam
Location: 18201 - 19136 (-)
Type: pfam
Location: 18201 - 19136 (-)
Gene ID: HRGMv2_2907_6_19
Type: pfam
Location: 19316 - 20323 (+)
Type: pfam
Location: 19316 - 20323 (+)
Gene ID: HRGMv2_2907_6_20
Type: TC
Location: 20649 - 21656 (+)
Type: TC
Location: 20649 - 21656 (+)
Gene ID: HRGMv2_2907_6_21
Type: TC
Location: 21646 - 22311 (+)
Type: TC
Location: 21646 - 22311 (+)
Gene ID: HRGMv2_2907_6_22
Type: TC
Location: 22366 - 23175 (+)
Type: TC
Location: 22366 - 23175 (+)
Gene ID: HRGMv2_2907_6_23
Type: STP
Location: 23551 - 24111 (-)
Type: STP
Location: 23551 - 24111 (-)
Gene ID: HRGMv2_2907_6_24
Type: TC
Location: 24273 - 25931 (+)
Type: TC
Location: 24273 - 25931 (+)
Gene ID: HRGMv2_2907_6_25
Type: TC
Location: 26003 - 26635 (-)
Type: TC
Location: 26003 - 26635 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS902
Species
UMGS902 sp934474225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.