Cluster: HRGMv2_2907_CGC1
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2907
- CGC Family ID: CGCFAM_03802
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2907_1 | HRGMv2_2907_1_24 | 19697 | 21094 | + | AA7 |
| NULL(UNKNOWN) | HRGMv2_2907_1 | HRGMv2_2907_1_25 | 21208 | 21633 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2907_1 | HRGMv2_2907_1_26 | 21639 | 22277 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2907_1 | HRGMv2_2907_1_27 | 22253 | 22969 | - | 3.A.1.4.10 |
| TC | HRGMv2_2907_1 | HRGMv2_2907_1_28 | 22962 | 23801 | - | 3.A.1.4.10 |
| TC | HRGMv2_2907_1 | HRGMv2_2907_1_29 | 23798 | 24895 | - | 3.A.1.4.8 |
| TC | HRGMv2_2907_1 | HRGMv2_2907_1_30 | 24910 | 25788 | - | 3.A.1.4.10 |
| pfam | HRGMv2_2907_1 | HRGMv2_2907_1_31 | 25952 | 27124 | - | ANF_receptor | Peripla_BP_6 |
| TC | HRGMv2_2907_1 | HRGMv2_2907_1_32 | 27371 | 28111 | + | 9.B.120.1.3 |
| TC | HRGMv2_2907_1 | HRGMv2_2907_1_33 | 28167 | 29540 | - | 2.A.3.8.12 |
Gene ID: HRGMv2_2907_1_24
Type: CAZyme
Location: 19697 - 21094 (+)
Type: CAZyme
Location: 19697 - 21094 (+)
Gene ID: HRGMv2_2907_1_25
Type:
Location: 21208 - 21633 (+)
Type:
Location: 21208 - 21633 (+)
Gene ID: HRGMv2_2907_1_26
Type:
Location: 21639 - 22277 (+)
Type:
Location: 21639 - 22277 (+)
Gene ID: HRGMv2_2907_1_27
Type: TC
Location: 22253 - 22969 (-)
Type: TC
Location: 22253 - 22969 (-)
Gene ID: HRGMv2_2907_1_28
Type: TC
Location: 22962 - 23801 (-)
Type: TC
Location: 22962 - 23801 (-)
Gene ID: HRGMv2_2907_1_29
Type: TC
Location: 23798 - 24895 (-)
Type: TC
Location: 23798 - 24895 (-)
Gene ID: HRGMv2_2907_1_30
Type: TC
Location: 24910 - 25788 (-)
Type: TC
Location: 24910 - 25788 (-)
Gene ID: HRGMv2_2907_1_31
Type: pfam
Location: 25952 - 27124 (-)
Type: pfam
Location: 25952 - 27124 (-)
Gene ID: HRGMv2_2907_1_32
Type: TC
Location: 27371 - 28111 (+)
Type: TC
Location: 27371 - 28111 (+)
Gene ID: HRGMv2_2907_1_33
Type: TC
Location: 28167 - 29540 (-)
Type: TC
Location: 28167 - 29540 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS902
Species
UMGS902 sp934474225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2907_1_25 | vegetarian > omnivore | 4.30793 | 0.01287 |
| HRGMv2_2907_1_25 | vegetarian > vegan | 16.36445 | 0.00141 |