Cluster: HRGMv2_2899_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2899
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2899_2 | HRGMv2_2899_2_162 | 178529 | 181075 | + | CBM67 | GH78 |
| NULL(UNKNOWN) | HRGMv2_2899_2 | HRGMv2_2899_2_163 | 181194 | 181601 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2899_2 | HRGMv2_2899_2_164 | 181788 | 181985 | - | DUF951 |
| TC | HRGMv2_2899_2 | HRGMv2_2899_2_165 | 182002 | 183720 | - | 3.A.1.106.3 |
Gene ID: HRGMv2_2899_2_162
Type: CAZyme
Location: 178529 - 181075 (+)
Type: CAZyme
Location: 178529 - 181075 (+)
Gene ID: HRGMv2_2899_2_163
Type:
Location: 181194 - 181601 (-)
Type:
Location: 181194 - 181601 (-)
Gene ID: HRGMv2_2899_2_164
Type: pfam
Location: 181788 - 181985 (-)
Type: pfam
Location: 181788 - 181985 (-)
Gene ID: HRGMv2_2899_2_165
Type: TC
Location: 182002 - 183720 (-)
Type: TC
Location: 182002 - 183720 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
QALR01
Species
QALR01 sp900553085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2899_2_162 | vegetarian > vegan | 18.47882 | 0.00749 |
| HRGMv2_2899_2_163 | vegetarian > vegan | 18.29475 | 0.00749 |