Cluster: HRGMv2_2899_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2899
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2899_1 | HRGMv2_2899_1_380 | 399005 | 400342 | - | GH4 |
| pfam | HRGMv2_2899_1 | HRGMv2_2899_1_381 | 400363 | 400836 | - | LOR |
| TC | HRGMv2_2899_1 | HRGMv2_2899_1_382 | 400910 | 402082 | - | 3.A.1.1.22 |
Gene ID: HRGMv2_2899_1_380
Type: CAZyme
Location: 399005 - 400342 (-)
Type: CAZyme
Location: 399005 - 400342 (-)
Gene ID: HRGMv2_2899_1_381
Type: pfam
Location: 400363 - 400836 (-)
Type: pfam
Location: 400363 - 400836 (-)
Gene ID: HRGMv2_2899_1_382
Type: TC
Location: 400910 - 402082 (-)
Type: TC
Location: 400910 - 402082 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
QALR01
Species
QALR01 sp900553085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2899_1_380 | vegetarian > vegan | 1.36594 | 0.00749 |
| HRGMv2_2899_1_382 | vegan > omnivore | 1.04678 | 0.01057 |