Cluster: HRGMv2_2899_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2899
- CGC Family ID: CGCFAM_01699
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2899_17 | HRGMv2_2899_17_12 | 7675 | 9525 | + | 3.A.3.6.10 |
| NULL(UNKNOWN) | HRGMv2_2899_17 | HRGMv2_2899_17_13 | 9613 | 10017 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2899_17 | HRGMv2_2899_17_14 | 10109 | 12688 | + | GT51 |
| CAZyme | HRGMv2_2899_17 | HRGMv2_2899_17_15 | 13079 | 13954 | + | GH43_17 |
| CAZyme | HRGMv2_2899_17 | HRGMv2_2899_17_16 | 14109 | 15284 | - | CE7 |
Gene ID: HRGMv2_2899_17_12
Type: TC
Location: 7675 - 9525 (+)
Type: TC
Location: 7675 - 9525 (+)
Gene ID: HRGMv2_2899_17_13
Type:
Location: 9613 - 10017 (-)
Type:
Location: 9613 - 10017 (-)
Gene ID: HRGMv2_2899_17_14
Type: CAZyme
Location: 10109 - 12688 (+)
Type: CAZyme
Location: 10109 - 12688 (+)
Gene ID: HRGMv2_2899_17_15
Type: CAZyme
Location: 13079 - 13954 (+)
Type: CAZyme
Location: 13079 - 13954 (+)
Gene ID: HRGMv2_2899_17_16
Type: CAZyme
Location: 14109 - 15284 (-)
Type: CAZyme
Location: 14109 - 15284 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
QALR01
Species
QALR01 sp900553085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2899_17_16 | vegetarian > vegan | 4.76752 | 0.00749 |