Cluster: HRGMv2_2899_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2899
- CGC Family ID: CGCFAM_05374
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2899_13 | HRGMv2_2899_13_38 | 42870 | 45776 | + | GH94 |
| pfam | HRGMv2_2899_13 | HRGMv2_2899_13_39 | 45877 | 46998 | - | ADP_ribosyl_GH |
| NULL(UNKNOWN) | HRGMv2_2899_13 | HRGMv2_2899_13_40 | 47440 | 47829 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2899_13 | HRGMv2_2899_13_41 | 47938 | 48303 | - | 9.B.55.2.2 |
| TC | HRGMv2_2899_13 | HRGMv2_2899_13_42 | 48463 | 50265 | - | 3.A.1.135.6 |
| TC | HRGMv2_2899_13 | HRGMv2_2899_13_43 | 50262 | 52025 | - | 3.A.1.135.6 |
Gene ID: HRGMv2_2899_13_38
Type: CAZyme
Location: 42870 - 45776 (+)
Type: CAZyme
Location: 42870 - 45776 (+)
Gene ID: HRGMv2_2899_13_39
Type: pfam
Location: 45877 - 46998 (-)
Type: pfam
Location: 45877 - 46998 (-)
Gene ID: HRGMv2_2899_13_40
Type:
Location: 47440 - 47829 (-)
Type:
Location: 47440 - 47829 (-)
Gene ID: HRGMv2_2899_13_41
Type: TC
Location: 47938 - 48303 (-)
Type: TC
Location: 47938 - 48303 (-)
Gene ID: HRGMv2_2899_13_42
Type: TC
Location: 48463 - 50265 (-)
Type: TC
Location: 48463 - 50265 (-)
Gene ID: HRGMv2_2899_13_43
Type: TC
Location: 50262 - 52025 (-)
Type: TC
Location: 50262 - 52025 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
QALR01
Species
QALR01 sp900553085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2899_13_38 | vegetarian > vegan | 2.66183 | 0.00749 |
| HRGMv2_2899_13_42 | vegetarian > vegan | 1.77772 | 0.00749 |