Cluster: HRGMv2_2899_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2899
- CGC Family ID: CGCFAM_05372
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2899_12 | HRGMv2_2899_12_30 | 28490 | 29305 | - | 2.A.88.3.1 |
| pfam | HRGMv2_2899_12 | HRGMv2_2899_12_31 | 29664 | 30524 | - | DUF11 | DUF11 | DUF7507 |
| STP | HRGMv2_2899_12 | HRGMv2_2899_12_32 | 30669 | 31256 | - | HD |
| CAZyme | HRGMv2_2899_12 | HRGMv2_2899_12_33 | 31249 | 33459 | - | GT4 |
Gene ID: HRGMv2_2899_12_30
Type: TC
Location: 28490 - 29305 (-)
Type: TC
Location: 28490 - 29305 (-)
Gene ID: HRGMv2_2899_12_31
Type: pfam
Location: 29664 - 30524 (-)
Type: pfam
Location: 29664 - 30524 (-)
Gene ID: HRGMv2_2899_12_32
Type: STP
Location: 30669 - 31256 (-)
Type: STP
Location: 30669 - 31256 (-)
Gene ID: HRGMv2_2899_12_33
Type: CAZyme
Location: 31249 - 33459 (-)
Type: CAZyme
Location: 31249 - 33459 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
QALR01
Species
QALR01 sp900553085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2899_12_30 | vegetarian > vegan | 2.89741 | 0.00749 |