Cluster: HRGMv2_2899_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2899
- CGC Family ID: CGCFAM_03371
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2899_6 | HRGMv2_2899_6_46 | 56222 | 58573 | - | GH95 |
| TC | HRGMv2_2899_6 | HRGMv2_2899_6_47 | 58644 | 60239 | - | 3.A.1.147.4 |
| TC | HRGMv2_2899_6 | HRGMv2_2899_6_48 | 60232 | 60966 | - | 3.A.1.147.6 |
Gene ID: HRGMv2_2899_6_46
Type: CAZyme
Location: 56222 - 58573 (-)
Type: CAZyme
Location: 56222 - 58573 (-)
Gene ID: HRGMv2_2899_6_47
Type: TC
Location: 58644 - 60239 (-)
Type: TC
Location: 58644 - 60239 (-)
Gene ID: HRGMv2_2899_6_48
Type: TC
Location: 60232 - 60966 (-)
Type: TC
Location: 60232 - 60966 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
QALR01
Species
QALR01 sp900553085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2899_6_46 | vegetarian > vegan | 2.99850 | 0.00749 |
| HRGMv2_2899_6_48 | vegetarian > vegan | 1.95608 | 0.00749 |