Cluster: HRGMv2_2899_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2899
- CGC Family ID: CGCFAM_05371
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2899_3 | HRGMv2_2899_3_121 | 132531 | 134837 | - | 1.C.105.2.8 |
| pfam | HRGMv2_2899_3 | HRGMv2_2899_3_122 | 134880 | 135392 | - | Hydrolase | PGP_phosphatase | Hydrolase_like | HAD_2 |
| CAZyme | HRGMv2_2899_3 | HRGMv2_2899_3_123 | 135688 | 136383 | + | CE4 |
Gene ID: HRGMv2_2899_3_121
Type: TC
Location: 132531 - 134837 (-)
Type: TC
Location: 132531 - 134837 (-)
Gene ID: HRGMv2_2899_3_122
Type: pfam
Location: 134880 - 135392 (-)
Type: pfam
Location: 134880 - 135392 (-)
Gene ID: HRGMv2_2899_3_123
Type: CAZyme
Location: 135688 - 136383 (+)
Type: CAZyme
Location: 135688 - 136383 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
QALR01
Species
QALR01 sp900553085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2899_3_123 | vegetarian > vegan | 3.70351 | 0.00749 |