Cluster: HRGMv2_2898_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2898
- CGC Family ID: CGCFAM_10218
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2898_1 | HRGMv2_2898_1_165 | 198855 | 200609 | + | 3.A.1.135.5 |
| TC | HRGMv2_2898_1 | HRGMv2_2898_1_166 | 200599 | 202530 | + | 3.A.1.135.5 |
| pfam | HRGMv2_2898_1 | HRGMv2_2898_1_167 | 202601 | 204133 | + | LysM | SipL | SipL |
| CAZyme | HRGMv2_2898_1 | HRGMv2_2898_1_168 | 204406 | 206808 | + | GT35 |
| CAZyme | HRGMv2_2898_1 | HRGMv2_2898_1_169 | 206812 | 208629 | + | GH13_39 |
| CAZyme | HRGMv2_2898_1 | HRGMv2_2898_1_170 | 209032 | 210978 | - | GH146 |
Gene ID: HRGMv2_2898_1_165
Type: TC
Location: 198855 - 200609 (+)
Type: TC
Location: 198855 - 200609 (+)
Gene ID: HRGMv2_2898_1_166
Type: TC
Location: 200599 - 202530 (+)
Type: TC
Location: 200599 - 202530 (+)
Gene ID: HRGMv2_2898_1_167
Type: pfam
Location: 202601 - 204133 (+)
Type: pfam
Location: 202601 - 204133 (+)
Gene ID: HRGMv2_2898_1_168
Type: CAZyme
Location: 204406 - 206808 (+)
Type: CAZyme
Location: 204406 - 206808 (+)
Gene ID: HRGMv2_2898_1_169
Type: CAZyme
Location: 206812 - 208629 (+)
Type: CAZyme
Location: 206812 - 208629 (+)
Gene ID: HRGMv2_2898_1_170
Type: CAZyme
Location: 209032 - 210978 (-)
Type: CAZyme
Location: 209032 - 210978 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.