Cluster: HRGMv2_2898_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2898
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2898_17 | HRGMv2_2898_17_2 | 548 | 1564 | - | GH130_9 |
| TF | HRGMv2_2898_17 | HRGMv2_2898_17_3 | 1764 | 2552 | + | HTH_AraC |
| pfam | HRGMv2_2898_17 | HRGMv2_2898_17_4 | 2661 | 3686 | - | DUF348 | 3D | G5 |
| TC | HRGMv2_2898_17 | HRGMv2_2898_17_5 | 4189 | 6012 | + | 2.A.35.2.1 |
| pfam | HRGMv2_2898_17 | HRGMv2_2898_17_6 | 6083 | 6934 | + | ATP_bind_3 |
| TC | HRGMv2_2898_17 | HRGMv2_2898_17_7 | 7036 | 7599 | + | 2.A.107.1.2 |
Gene ID: HRGMv2_2898_17_2
Type: CAZyme
Location: 548 - 1564 (-)
Type: CAZyme
Location: 548 - 1564 (-)
Gene ID: HRGMv2_2898_17_3
Type: TF
Location: 1764 - 2552 (+)
Type: TF
Location: 1764 - 2552 (+)
Gene ID: HRGMv2_2898_17_4
Type: pfam
Location: 2661 - 3686 (-)
Type: pfam
Location: 2661 - 3686 (-)
Gene ID: HRGMv2_2898_17_5
Type: TC
Location: 4189 - 6012 (+)
Type: TC
Location: 4189 - 6012 (+)
Gene ID: HRGMv2_2898_17_6
Type: pfam
Location: 6083 - 6934 (+)
Type: pfam
Location: 6083 - 6934 (+)
Gene ID: HRGMv2_2898_17_7
Type: TC
Location: 7036 - 7599 (+)
Type: TC
Location: 7036 - 7599 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.