Cluster: HRGMv2_2898_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2898
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2898_12 | HRGMv2_2898_12_13 | 10363 | 12735 | + | GH2 |
| pfam | HRGMv2_2898_12 | HRGMv2_2898_12_14 | 13524 | 14510 | - | GFO_IDH_MocA | Shikimate_DH | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| TC | HRGMv2_2898_12 | HRGMv2_2898_12_15 | 14566 | 16209 | - | 8.A.7.1.1 |
| STP | HRGMv2_2898_12 | HRGMv2_2898_12_16 | 16274 | 16540 | - | PTS-HPr |
| TC | HRGMv2_2898_12 | HRGMv2_2898_12_17 | 16565 | 18124 | - | 4.A.2.1.20 |
| TC | HRGMv2_2898_12 | HRGMv2_2898_12_18 | 18121 | 18480 | - | 4.A.2.1.4 |
Gene ID: HRGMv2_2898_12_13
Type: CAZyme
Location: 10363 - 12735 (+)
Type: CAZyme
Location: 10363 - 12735 (+)
Gene ID: HRGMv2_2898_12_14
Type: pfam
Location: 13524 - 14510 (-)
Type: pfam
Location: 13524 - 14510 (-)
Gene ID: HRGMv2_2898_12_15
Type: TC
Location: 14566 - 16209 (-)
Type: TC
Location: 14566 - 16209 (-)
Gene ID: HRGMv2_2898_12_16
Type: STP
Location: 16274 - 16540 (-)
Type: STP
Location: 16274 - 16540 (-)
Gene ID: HRGMv2_2898_12_17
Type: TC
Location: 16565 - 18124 (-)
Type: TC
Location: 16565 - 18124 (-)
Gene ID: HRGMv2_2898_12_18
Type: TC
Location: 18121 - 18480 (-)
Type: TC
Location: 18121 - 18480 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.