Cluster: HRGMv2_2898_CGC13
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2898
- CGC Family ID: CGCFAM_10216
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2898_7 | HRGMv2_2898_7_67 | 67671 | 68174 | - | 2.A.87.3.1 |
| pfam | HRGMv2_2898_7 | HRGMv2_2898_7_68 | 68178 | 68522 | - | NusG_II |
| TC | HRGMv2_2898_7 | HRGMv2_2898_7_69 | 68530 | 69315 | - | 3.D.6.1.1 |
| TC | HRGMv2_2898_7 | HRGMv2_2898_7_70 | 69319 | 69921 | - | 3.D.6.1.2 |
| TC | HRGMv2_2898_7 | HRGMv2_2898_7_71 | 69923 | 70609 | - | 3.D.6.1.2 |
| pfam | HRGMv2_2898_7 | HRGMv2_2898_7_72 | 70609 | 71781 | - | FMN_bind | FMN_bind |
| TC | HRGMv2_2898_7 | HRGMv2_2898_7_73 | 71778 | 72695 | - | 3.D.6.1.2 |
| TC | HRGMv2_2898_7 | HRGMv2_2898_7_74 | 72696 | 74000 | - | 3.D.6.1.2 |
| CAZyme | HRGMv2_2898_7 | HRGMv2_2898_7_75 | 74189 | 75148 | - | GT2 |
| STP | HRGMv2_2898_7 | HRGMv2_2898_7_76 | 75297 | 76214 | + | NIR_SIR | NIR_SIR_ferr |
| STP | HRGMv2_2898_7 | HRGMv2_2898_7_77 | 76217 | 77143 | + | Peripla_BP_2 |
| TC | HRGMv2_2898_7 | HRGMv2_2898_7_78 | 77100 | 78116 | + | 3.A.1.14.5 |
| TC | HRGMv2_2898_7 | HRGMv2_2898_7_79 | 78109 | 78855 | + | 3.A.1.14.8 |
| TC | HRGMv2_2898_7 | HRGMv2_2898_7_80 | 79134 | 79697 | - | 3.A.1.25.3 |
Gene ID: HRGMv2_2898_7_67
Type: TC
Location: 67671 - 68174 (-)
Type: TC
Location: 67671 - 68174 (-)
Gene ID: HRGMv2_2898_7_68
Type: pfam
Location: 68178 - 68522 (-)
Type: pfam
Location: 68178 - 68522 (-)
Gene ID: HRGMv2_2898_7_69
Type: TC
Location: 68530 - 69315 (-)
Type: TC
Location: 68530 - 69315 (-)
Gene ID: HRGMv2_2898_7_70
Type: TC
Location: 69319 - 69921 (-)
Type: TC
Location: 69319 - 69921 (-)
Gene ID: HRGMv2_2898_7_71
Type: TC
Location: 69923 - 70609 (-)
Type: TC
Location: 69923 - 70609 (-)
Gene ID: HRGMv2_2898_7_72
Type: pfam
Location: 70609 - 71781 (-)
Type: pfam
Location: 70609 - 71781 (-)
Gene ID: HRGMv2_2898_7_73
Type: TC
Location: 71778 - 72695 (-)
Type: TC
Location: 71778 - 72695 (-)
Gene ID: HRGMv2_2898_7_74
Type: TC
Location: 72696 - 74000 (-)
Type: TC
Location: 72696 - 74000 (-)
Gene ID: HRGMv2_2898_7_75
Type: CAZyme
Location: 74189 - 75148 (-)
Type: CAZyme
Location: 74189 - 75148 (-)
Gene ID: HRGMv2_2898_7_76
Type: STP
Location: 75297 - 76214 (+)
Type: STP
Location: 75297 - 76214 (+)
Gene ID: HRGMv2_2898_7_77
Type: STP
Location: 76217 - 77143 (+)
Type: STP
Location: 76217 - 77143 (+)
Gene ID: HRGMv2_2898_7_78
Type: TC
Location: 77100 - 78116 (+)
Type: TC
Location: 77100 - 78116 (+)
Gene ID: HRGMv2_2898_7_79
Type: TC
Location: 78109 - 78855 (+)
Type: TC
Location: 78109 - 78855 (+)
Gene ID: HRGMv2_2898_7_80
Type: TC
Location: 79134 - 79697 (-)
Type: TC
Location: 79134 - 79697 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.