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Cluster: HRGMv2_2898_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2898_1 HRGMv2_2898_1_32 43582 44649 + 3.A.1.2.3
TC HRGMv2_2898_1 HRGMv2_2898_1_33 44731 46275 + 3.A.1.2.3
TC HRGMv2_2898_1 HRGMv2_2898_1_34 46292 47377 + 3.A.1.2.3
pfam HRGMv2_2898_1 HRGMv2_2898_1_35 47406 47771 + Flg_new
TF HRGMv2_2898_1 HRGMv2_2898_1_36 47913 49508 + HTH_AraC
TC HRGMv2_2898_1 HRGMv2_2898_1_37 49505 51250 + 8.A.59.2.1
STP HRGMv2_2898_1 HRGMv2_2898_1_38 51240 52202 + Peripla_BP_1
TC HRGMv2_2898_1 HRGMv2_2898_1_39 52218 53207 + 8.A.5.1.6
pfam HRGMv2_2898_1 HRGMv2_2898_1_40 53286 53906 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9
pfam HRGMv2_2898_1 HRGMv2_2898_1_41 54180 55343 + Fe-ADH | Fe-ADH_2 | ADH_Fe_C
TC HRGMv2_2898_1 HRGMv2_2898_1_42 55451 56809 + 1.A.26.1.2
TF HRGMv2_2898_1 HRGMv2_2898_1_43 56814 57659 - HTH_AraC
pfam HRGMv2_2898_1 HRGMv2_2898_1_44 57770 59212 + Arabinose_Iso_C
CAZyme HRGMv2_2898_1 HRGMv2_2898_1_45 59240 62365 + GH106
Gene ID: HRGMv2_2898_1_32
Type: TC
Location: 43582 - 44649 (+)
Gene ID: HRGMv2_2898_1_33
Type: TC
Location: 44731 - 46275 (+)
Gene ID: HRGMv2_2898_1_34
Type: TC
Location: 46292 - 47377 (+)
Gene ID: HRGMv2_2898_1_35
Type: pfam
Location: 47406 - 47771 (+)
Gene ID: HRGMv2_2898_1_36
Type: TF
Location: 47913 - 49508 (+)
Gene ID: HRGMv2_2898_1_37
Type: TC
Location: 49505 - 51250 (+)
Gene ID: HRGMv2_2898_1_38
Type: STP
Location: 51240 - 52202 (+)
Gene ID: HRGMv2_2898_1_39
Type: TC
Location: 52218 - 53207 (+)
Gene ID: HRGMv2_2898_1_40
Type: pfam
Location: 53286 - 53906 (-)
Gene ID: HRGMv2_2898_1_41
Type: pfam
Location: 54180 - 55343 (+)
Gene ID: HRGMv2_2898_1_42
Type: TC
Location: 55451 - 56809 (+)
Gene ID: HRGMv2_2898_1_43
Type: TF
Location: 56814 - 57659 (-)
Gene ID: HRGMv2_2898_1_44
Type: pfam
Location: 57770 - 59212 (+)
Gene ID: HRGMv2_2898_1_45
Type: CAZyme
Location: 59240 - 62365 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
UBA737
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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