Cluster: HRGMv2_2896_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2896
- CGC Family ID: CGCFAM_00121
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2896_9 | HRGMv2_2896_9_2 | 695 | 2257 | - | 9.B.33.1.1 |
| pfam | HRGMv2_2896_9 | HRGMv2_2896_9_3 | 2426 | 3874 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_2896_9 | HRGMv2_2896_9_4 | 3847 | 5034 | - | GH94 |
Gene ID: HRGMv2_2896_9_2
Type: TC
Location: 695 - 2257 (-)
Type: TC
Location: 695 - 2257 (-)
Gene ID: HRGMv2_2896_9_3
Type: pfam
Location: 2426 - 3874 (-)
Type: pfam
Location: 2426 - 3874 (-)
Gene ID: HRGMv2_2896_9_4
Type: CAZyme
Location: 3847 - 5034 (-)
Type: CAZyme
Location: 3847 - 5034 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp900549645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.