Cluster: HRGMv2_2888_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2888
- CGC Family ID: CGCFAM_03326
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2888_13 | HRGMv2_2888_13_16 | 16654 | 17418 | + | 2.A.79.1.5 |
| TC | HRGMv2_2888_13 | HRGMv2_2888_13_17 | 17415 | 17891 | + | 2.A.79.1.6 |
| pfam | HRGMv2_2888_13 | HRGMv2_2888_13_18 | 18003 | 18548 | + | DUF436 |
| CAZyme | HRGMv2_2888_13 | HRGMv2_2888_13_19 | 18879 | 20282 | - | GT2 | GT2 |
Gene ID: HRGMv2_2888_13_16
Type: TC
Location: 16654 - 17418 (+)
Type: TC
Location: 16654 - 17418 (+)
Gene ID: HRGMv2_2888_13_17
Type: TC
Location: 17415 - 17891 (+)
Type: TC
Location: 17415 - 17891 (+)
Gene ID: HRGMv2_2888_13_18
Type: pfam
Location: 18003 - 18548 (+)
Type: pfam
Location: 18003 - 18548 (+)
Gene ID: HRGMv2_2888_13_19
Type: CAZyme
Location: 18879 - 20282 (-)
Type: CAZyme
Location: 18879 - 20282 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Evtepia
Species
Evtepia faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2888_13_19 | vegetarian > vegan | 2.15019 | 0.01057 |