dbCAN Logo

Cluster: HRGMv2_2888_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2888_8 HRGMv2_2888_8_15 14948 15652 + 3.A.1.148.3
NULL(UNKNOWN) HRGMv2_2888_8 HRGMv2_2888_8_16 15645 16805 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2888_8 HRGMv2_2888_8_17 16867 17841 - DUF1835 | DUF3658
CAZyme HRGMv2_2888_8 HRGMv2_2888_8_18 18513 19589 - GT2
TC HRGMv2_2888_8 HRGMv2_2888_8_19 20784 22550 - 2.A.58.2.2
pfam HRGMv2_2888_8 HRGMv2_2888_8_20 22678 23358 - PhoU | PhoU
TC HRGMv2_2888_8 HRGMv2_2888_8_21 23358 24146 - 3.A.1.7.5
TC HRGMv2_2888_8 HRGMv2_2888_8_22 24149 25003 - 3.A.1.7.5
TC HRGMv2_2888_8 HRGMv2_2888_8_23 25005 25949 - 3.A.1.7.5
Gene ID: HRGMv2_2888_8_15
Type: TC
Location: 14948 - 15652 (+)
Gene ID: HRGMv2_2888_8_16
Type:
Location: 15645 - 16805 (+)
Gene ID: HRGMv2_2888_8_17
Type: pfam
Location: 16867 - 17841 (-)
Gene ID: HRGMv2_2888_8_18
Type: CAZyme
Location: 18513 - 19589 (-)
Gene ID: HRGMv2_2888_8_19
Type: TC
Location: 20784 - 22550 (-)
Gene ID: HRGMv2_2888_8_20
Type: pfam
Location: 22678 - 23358 (-)
Gene ID: HRGMv2_2888_8_21
Type: TC
Location: 23358 - 24146 (-)
Gene ID: HRGMv2_2888_8_22
Type: TC
Location: 24149 - 25003 (-)
Gene ID: HRGMv2_2888_8_23
Type: TC
Location: 25005 - 25949 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List