Cluster: HRGMv2_2888_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2888
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2888_5 | HRGMv2_2888_5_36 | 31051 | 31818 | + | 3.A.1.134.4 |
| TC | HRGMv2_2888_5 | HRGMv2_2888_5_37 | 31811 | 33814 | + | 3.A.1.134.4 |
| TF | HRGMv2_2888_5 | HRGMv2_2888_5_38 | 33930 | 34601 | + | Trans_reg_C |
| STP | HRGMv2_2888_5 | HRGMv2_2888_5_39 | 34603 | 35604 | + | HATPase_c |
| TC | HRGMv2_2888_5 | HRGMv2_2888_5_40 | 35671 | 36750 | - | 4.D.2.1.5 |
| CAZyme | HRGMv2_2888_5 | HRGMv2_2888_5_41 | 36743 | 37429 | - | CE4 |
| CAZyme | HRGMv2_2888_5 | HRGMv2_2888_5_42 | 37423 | 38490 | - | GT28 |
Gene ID: HRGMv2_2888_5_36
Type: TC
Location: 31051 - 31818 (+)
Type: TC
Location: 31051 - 31818 (+)
Gene ID: HRGMv2_2888_5_37
Type: TC
Location: 31811 - 33814 (+)
Type: TC
Location: 31811 - 33814 (+)
Gene ID: HRGMv2_2888_5_38
Type: TF
Location: 33930 - 34601 (+)
Type: TF
Location: 33930 - 34601 (+)
Gene ID: HRGMv2_2888_5_39
Type: STP
Location: 34603 - 35604 (+)
Type: STP
Location: 34603 - 35604 (+)
Gene ID: HRGMv2_2888_5_40
Type: TC
Location: 35671 - 36750 (-)
Type: TC
Location: 35671 - 36750 (-)
Gene ID: HRGMv2_2888_5_41
Type: CAZyme
Location: 36743 - 37429 (-)
Type: CAZyme
Location: 36743 - 37429 (-)
Gene ID: HRGMv2_2888_5_42
Type: CAZyme
Location: 37423 - 38490 (-)
Type: CAZyme
Location: 37423 - 38490 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Evtepia
Species
Evtepia faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.