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Cluster: HRGMv2_2886_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2886_9 HRGMv2_2886_9_29 34473 35645 + 2.A.9.3.4
pfam HRGMv2_2886_9 HRGMv2_2886_9_30 35655 36680 + R3H | KH_KhpA-B | Jag_N
pfam HRGMv2_2886_9 HRGMv2_2886_9_31 36622 37992 - ADI
CAZyme HRGMv2_2886_9 HRGMv2_2886_9_32 38310 39782 - GH77
TF HRGMv2_2886_9 HRGMv2_2886_9_33 39788 40807 - LacI
TC HRGMv2_2886_9 HRGMv2_2886_9_34 40804 41649 - 3.A.1.1.45
TC HRGMv2_2886_9 HRGMv2_2886_9_35 41646 42578 - 3.A.1.1.45
TC HRGMv2_2886_9 HRGMv2_2886_9_36 42751 44043 - 3.A.1.1.45
Gene ID: HRGMv2_2886_9_29
Type: TC
Location: 34473 - 35645 (+)
Gene ID: HRGMv2_2886_9_30
Type: pfam
Location: 35655 - 36680 (+)
Gene ID: HRGMv2_2886_9_31
Type: pfam
Location: 36622 - 37992 (-)
Gene ID: HRGMv2_2886_9_32
Type: CAZyme
Location: 38310 - 39782 (-)
Gene ID: HRGMv2_2886_9_33
Type: TF
Location: 39788 - 40807 (-)
Gene ID: HRGMv2_2886_9_34
Type: TC
Location: 40804 - 41649 (-)
Gene ID: HRGMv2_2886_9_35
Type: TC
Location: 41646 - 42578 (-)
Gene ID: HRGMv2_2886_9_36
Type: TC
Location: 42751 - 44043 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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