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Cluster: HRGMv2_2886_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2886_4 HRGMv2_2886_4_83 80205 82796 + GT51
pfam HRGMv2_2886_4 HRGMv2_2886_4_84 82820 83686 + Methyltrans_SAM
TC HRGMv2_2886_4 HRGMv2_2886_4_85 83692 84537 + 3.A.1.26.7
TC HRGMv2_2886_4 HRGMv2_2886_4_86 84556 85422 + 3.A.1.26.7
TC HRGMv2_2886_4 HRGMv2_2886_4_87 85415 86218 + 3.A.1.25.4
pfam HRGMv2_2886_4 HRGMv2_2886_4_88 86344 87108 + PseudoU_synth_1 | PseudoU_synth_1
pfam HRGMv2_2886_4 HRGMv2_2886_4_89 87098 88270 + DUF5711
TC HRGMv2_2886_4 HRGMv2_2886_4_90 88338 90629 + 3.A.9.1.2
Gene ID: HRGMv2_2886_4_83
Type: CAZyme
Location: 80205 - 82796 (+)
Gene ID: HRGMv2_2886_4_84
Type: pfam
Location: 82820 - 83686 (+)
Gene ID: HRGMv2_2886_4_85
Type: TC
Location: 83692 - 84537 (+)
Gene ID: HRGMv2_2886_4_86
Type: TC
Location: 84556 - 85422 (+)
Gene ID: HRGMv2_2886_4_87
Type: TC
Location: 85415 - 86218 (+)
Gene ID: HRGMv2_2886_4_88
Type: pfam
Location: 86344 - 87108 (+)
Gene ID: HRGMv2_2886_4_89
Type: pfam
Location: 87098 - 88270 (+)
Gene ID: HRGMv2_2886_4_90
Type: TC
Location: 88338 - 90629 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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