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Cluster: HRGMv2_2886_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2886_3 HRGMv2_2886_3_98 97239 97688 + 1.A.22.1.4
pfam HRGMv2_2886_3 HRGMv2_2886_3_99 97955 98620 + PAP2 | PAP2_3
TC HRGMv2_2886_3 HRGMv2_2886_3_100 98641 99720 + 4.D.2.1.5
pfam HRGMv2_2886_3 HRGMv2_2886_3_101 99717 100409 + CDP-OH_P_transf
pfam HRGMv2_2886_3 HRGMv2_2886_3_102 100394 101248 + PS_Dcarbxylase
CAZyme HRGMv2_2886_3 HRGMv2_2886_3_103 101325 102581 + GT1
NULL(UNKNOWN) HRGMv2_2886_3 HRGMv2_2886_3_104 102916 103119 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2886_3 HRGMv2_2886_3_105 103308 105902 + 3.A.9.1.2
Gene ID: HRGMv2_2886_3_98
Type: TC
Location: 97239 - 97688 (+)
Gene ID: HRGMv2_2886_3_99
Type: pfam
Location: 97955 - 98620 (+)
Gene ID: HRGMv2_2886_3_100
Type: TC
Location: 98641 - 99720 (+)
Gene ID: HRGMv2_2886_3_101
Type: pfam
Location: 99717 - 100409 (+)
Gene ID: HRGMv2_2886_3_102
Type: pfam
Location: 100394 - 101248 (+)
Gene ID: HRGMv2_2886_3_103
Type: CAZyme
Location: 101325 - 102581 (+)
Gene ID: HRGMv2_2886_3_104
Type:
Location: 102916 - 103119 (-)
Gene ID: HRGMv2_2886_3_105
Type: TC
Location: 103308 - 105902 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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