dbCAN Logo

Cluster: HRGMv2_2886_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2886_1 HRGMv2_2886_1_49 54239 56431 - 3.A.1.109.1
TC HRGMv2_2886_1 HRGMv2_2886_1_50 56444 58621 - 3.A.1.112.9
NULL(UNKNOWN) HRGMv2_2886_1 HRGMv2_2886_1_51 58632 59105 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2886_1 HRGMv2_2886_1_52 59365 60186 + GH25
pfam HRGMv2_2886_1 HRGMv2_2886_1_53 60183 62057 + DUF2079
TC HRGMv2_2886_1 HRGMv2_2886_1_54 62323 64191 + 3.A.1.121.4
pfam HRGMv2_2886_1 HRGMv2_2886_1_55 64191 64613 + Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
TC HRGMv2_2886_1 HRGMv2_2886_1_56 64665 65480 + 3.A.1.132.3
Gene ID: HRGMv2_2886_1_49
Type: TC
Location: 54239 - 56431 (-)
Gene ID: HRGMv2_2886_1_50
Type: TC
Location: 56444 - 58621 (-)
Gene ID: HRGMv2_2886_1_51
Type:
Location: 58632 - 59105 (-)
Gene ID: HRGMv2_2886_1_52
Type: CAZyme
Location: 59365 - 60186 (+)
Gene ID: HRGMv2_2886_1_53
Type: pfam
Location: 60183 - 62057 (+)
Gene ID: HRGMv2_2886_1_54
Type: TC
Location: 62323 - 64191 (+)
Gene ID: HRGMv2_2886_1_55
Type: pfam
Location: 64191 - 64613 (+)
Gene ID: HRGMv2_2886_1_56
Type: TC
Location: 64665 - 65480 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List