Cluster: HRGMv2_2886_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2886
- CGC Family ID: CGCFAM_10210
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2886_36 | HRGMv2_2886_36_2 | 1247 | 3073 | - | 3.A.1.106.3 |
| TC | HRGMv2_2886_36 | HRGMv2_2886_36_3 | 3066 | 4904 | - | 3.A.1.106.8 |
| TC | HRGMv2_2886_36 | HRGMv2_2886_36_4 | 5651 | 6373 | + | 3.A.1.20.2 |
| pfam | HRGMv2_2886_36 | HRGMv2_2886_36_5 | 6367 | 7290 | + | SUFBD_core |
| CAZyme | HRGMv2_2886_36 | HRGMv2_2886_36_6 | 7568 | 8812 | - | GT2 |
Gene ID: HRGMv2_2886_36_2
Type: TC
Location: 1247 - 3073 (-)
Type: TC
Location: 1247 - 3073 (-)
Gene ID: HRGMv2_2886_36_3
Type: TC
Location: 3066 - 4904 (-)
Type: TC
Location: 3066 - 4904 (-)
Gene ID: HRGMv2_2886_36_4
Type: TC
Location: 5651 - 6373 (+)
Type: TC
Location: 5651 - 6373 (+)
Gene ID: HRGMv2_2886_36_5
Type: pfam
Location: 6367 - 7290 (+)
Type: pfam
Location: 6367 - 7290 (+)
Gene ID: HRGMv2_2886_36_6
Type: CAZyme
Location: 7568 - 8812 (-)
Type: CAZyme
Location: 7568 - 8812 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp934654755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2886_36_6 | vegetarian > vegan | 1.44595 | 0.00363 |