Cluster: HRGMv2_2885_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2885
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2885_39 | HRGMv2_2885_39_6 | 4060 | 4827 | + | 3.A.1.134.4 |
| TC | HRGMv2_2885_39 | HRGMv2_2885_39_7 | 4820 | 6805 | + | 3.A.1.134.4 |
| TF | HRGMv2_2885_39 | HRGMv2_2885_39_8 | 6912 | 7583 | + | Trans_reg_C |
| STP | HRGMv2_2885_39 | HRGMv2_2885_39_9 | 7585 | 8583 | + | HATPase_c |
| TC | HRGMv2_2885_39 | HRGMv2_2885_39_10 | 8664 | 9710 | - | 4.D.2.1.5 |
| CAZyme | HRGMv2_2885_39 | HRGMv2_2885_39_11 | 9707 | 10393 | - | CE4 |
| CAZyme | HRGMv2_2885_39 | HRGMv2_2885_39_12 | 10387 | 11460 | - | GT28 |
Gene ID: HRGMv2_2885_39_6
Type: TC
Location: 4060 - 4827 (+)
Type: TC
Location: 4060 - 4827 (+)
Gene ID: HRGMv2_2885_39_7
Type: TC
Location: 4820 - 6805 (+)
Type: TC
Location: 4820 - 6805 (+)
Gene ID: HRGMv2_2885_39_8
Type: TF
Location: 6912 - 7583 (+)
Type: TF
Location: 6912 - 7583 (+)
Gene ID: HRGMv2_2885_39_9
Type: STP
Location: 7585 - 8583 (+)
Type: STP
Location: 7585 - 8583 (+)
Gene ID: HRGMv2_2885_39_10
Type: TC
Location: 8664 - 9710 (-)
Type: TC
Location: 8664 - 9710 (-)
Gene ID: HRGMv2_2885_39_11
Type: CAZyme
Location: 9707 - 10393 (-)
Type: CAZyme
Location: 9707 - 10393 (-)
Gene ID: HRGMv2_2885_39_12
Type: CAZyme
Location: 10387 - 11460 (-)
Type: CAZyme
Location: 10387 - 11460 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Evtepia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.