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Cluster: HRGMv2_2885_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2885_29 HRGMv2_2885_29_5 3732 5585 + CE4
pfam HRGMv2_2885_29 HRGMv2_2885_29_6 5639 6976 - MatE | MatE
TC HRGMv2_2885_29 HRGMv2_2885_29_7 7199 8563 + 2.A.38.1.1
TC HRGMv2_2885_29 HRGMv2_2885_29_8 8681 10117 + 2.A.38.1.1
TC HRGMv2_2885_29 HRGMv2_2885_29_9 10319 12442 + 3.A.10.1.13
pfam HRGMv2_2885_29 HRGMv2_2885_29_10 12628 13572 + ZnuA
TC HRGMv2_2885_29 HRGMv2_2885_29_11 13569 14354 + 3.A.1.15.5
TC HRGMv2_2885_29 HRGMv2_2885_29_12 14351 15196 + 3.A.1.15.13
Gene ID: HRGMv2_2885_29_5
Type: CAZyme
Location: 3732 - 5585 (+)
Gene ID: HRGMv2_2885_29_6
Type: pfam
Location: 5639 - 6976 (-)
Gene ID: HRGMv2_2885_29_7
Type: TC
Location: 7199 - 8563 (+)
Gene ID: HRGMv2_2885_29_8
Type: TC
Location: 8681 - 10117 (+)
Gene ID: HRGMv2_2885_29_9
Type: TC
Location: 10319 - 12442 (+)
Gene ID: HRGMv2_2885_29_10
Type: pfam
Location: 12628 - 13572 (+)
Gene ID: HRGMv2_2885_29_11
Type: TC
Location: 13569 - 14354 (+)
Gene ID: HRGMv2_2885_29_12
Type: TC
Location: 14351 - 15196 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
Evtepia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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