Cluster: HRGMv2_2885_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2885
- CGC Family ID: CGCFAM_10208
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2885_4 | HRGMv2_2885_4_29 | 27874 | 29304 | + | AA4 |
| pfam | HRGMv2_2885_4 | HRGMv2_2885_4_30 | 29489 | 30541 | + | SLH | SLH |
| TC | HRGMv2_2885_4 | HRGMv2_2885_4_31 | 30702 | 32819 | - | 1.B.52.2.1 |
Gene ID: HRGMv2_2885_4_29
Type: CAZyme
Location: 27874 - 29304 (+)
Type: CAZyme
Location: 27874 - 29304 (+)
Gene ID: HRGMv2_2885_4_30
Type: pfam
Location: 29489 - 30541 (+)
Type: pfam
Location: 29489 - 30541 (+)
Gene ID: HRGMv2_2885_4_31
Type: TC
Location: 30702 - 32819 (-)
Type: TC
Location: 30702 - 32819 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Evtepia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.