Cluster: HRGMv2_2883_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2883
- CGC Family ID: CGCFAM_05299
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2883_21 | HRGMv2_2883_21_25 | 23936 | 25357 | - | 2.A.25.1.5 |
| pfam | HRGMv2_2883_21 | HRGMv2_2883_21_26 | 25546 | 27021 | - | AA_permease | AA_permease_2 |
| TF | HRGMv2_2883_21 | HRGMv2_2883_21_27 | 27660 | 28562 | + | HTH_1 |
| CAZyme | HRGMv2_2883_21 | HRGMv2_2883_21_28 | 28753 | 29553 | - | CE4 |
| pfam | HRGMv2_2883_21 | HRGMv2_2883_21_29 | 29896 | 31356 | + | NAPRTase_N | NAPRTase_C |
| TF | HRGMv2_2883_21 | HRGMv2_2883_21_30 | 31389 | 31898 | + | HTH_11 |
| TC | HRGMv2_2883_21 | HRGMv2_2883_21_31 | 32013 | 33119 | + | 9.A.23.1.1 |
Gene ID: HRGMv2_2883_21_25
Type: TC
Location: 23936 - 25357 (-)
Type: TC
Location: 23936 - 25357 (-)
Gene ID: HRGMv2_2883_21_26
Type: pfam
Location: 25546 - 27021 (-)
Type: pfam
Location: 25546 - 27021 (-)
Gene ID: HRGMv2_2883_21_27
Type: TF
Location: 27660 - 28562 (+)
Type: TF
Location: 27660 - 28562 (+)
Gene ID: HRGMv2_2883_21_28
Type: CAZyme
Location: 28753 - 29553 (-)
Type: CAZyme
Location: 28753 - 29553 (-)
Gene ID: HRGMv2_2883_21_29
Type: pfam
Location: 29896 - 31356 (+)
Type: pfam
Location: 29896 - 31356 (+)
Gene ID: HRGMv2_2883_21_30
Type: TF
Location: 31389 - 31898 (+)
Type: TF
Location: 31389 - 31898 (+)
Gene ID: HRGMv2_2883_21_31
Type: TC
Location: 32013 - 33119 (+)
Type: TC
Location: 32013 - 33119 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Evtepia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.