Cluster: HRGMv2_2881_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2881
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2881_39 | HRGMv2_2881_39_2 | 824 | 1963 | + | GT4 |
| STP | HRGMv2_2881_39 | HRGMv2_2881_39_3 | 2242 | 3372 | - | Peripla_BP_2 |
| TC | HRGMv2_2881_39 | HRGMv2_2881_39_4 | 3432 | 4202 | - | 3.A.1.14.2 |
| TC | HRGMv2_2881_39 | HRGMv2_2881_39_5 | 4205 | 5206 | - | 3.A.1.14.10 |
Gene ID: HRGMv2_2881_39_2
Type: CAZyme
Location: 824 - 1963 (+)
Type: CAZyme
Location: 824 - 1963 (+)
Gene ID: HRGMv2_2881_39_3
Type: STP
Location: 2242 - 3372 (-)
Type: STP
Location: 2242 - 3372 (-)
Gene ID: HRGMv2_2881_39_4
Type: TC
Location: 3432 - 4202 (-)
Type: TC
Location: 3432 - 4202 (-)
Gene ID: HRGMv2_2881_39_5
Type: TC
Location: 4205 - 5206 (-)
Type: TC
Location: 4205 - 5206 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp000437015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.