Cluster: HRGMv2_2881_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2881
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2881_35 | HRGMv2_2881_35_3 | 1483 | 3342 | + | 3.A.1.106.3 |
| TC | HRGMv2_2881_35 | HRGMv2_2881_35_4 | 3339 | 5195 | + | 3.A.1.135.5 |
| pfam | HRGMv2_2881_35 | HRGMv2_2881_35_5 | 5313 | 7553 | - | SH3_3 |
| pfam | HRGMv2_2881_35 | HRGMv2_2881_35_6 | 7906 | 10119 | + | Sulfatase |
| CAZyme | HRGMv2_2881_35 | HRGMv2_2881_35_7 | 10132 | 11220 | + | GH179 |
Gene ID: HRGMv2_2881_35_3
Type: TC
Location: 1483 - 3342 (+)
Type: TC
Location: 1483 - 3342 (+)
Gene ID: HRGMv2_2881_35_4
Type: TC
Location: 3339 - 5195 (+)
Type: TC
Location: 3339 - 5195 (+)
Gene ID: HRGMv2_2881_35_5
Type: pfam
Location: 5313 - 7553 (-)
Type: pfam
Location: 5313 - 7553 (-)
Gene ID: HRGMv2_2881_35_6
Type: pfam
Location: 7906 - 10119 (+)
Type: pfam
Location: 7906 - 10119 (+)
Gene ID: HRGMv2_2881_35_7
Type: CAZyme
Location: 10132 - 11220 (+)
Type: CAZyme
Location: 10132 - 11220 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp000437015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.