Cluster: HRGMv2_2881_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2881
- CGC Family ID: CGCFAM_00918
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2881_22 | HRGMv2_2881_22_6 | 6082 | 7956 | - | GH127 |
| TF | HRGMv2_2881_22 | HRGMv2_2881_22_7 | 8055 | 8822 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2881_22 | HRGMv2_2881_22_8 | 9064 | 10524 | + | 2.A.50.2.1 |
Gene ID: HRGMv2_2881_22_6
Type: CAZyme
Location: 6082 - 7956 (-)
Type: CAZyme
Location: 6082 - 7956 (-)
Gene ID: HRGMv2_2881_22_7
Type: TF
Location: 8055 - 8822 (+)
Type: TF
Location: 8055 - 8822 (+)
Gene ID: HRGMv2_2881_22_8
Type: TC
Location: 9064 - 10524 (+)
Type: TC
Location: 9064 - 10524 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp000437015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.