Cluster: HRGMv2_2881_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2881
- CGC Family ID: CGCFAM_00749
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2881_13 | HRGMv2_2881_13_1 | 237 | 1988 | + | 3.A.1.135.5 |
| TC | HRGMv2_2881_13 | HRGMv2_2881_13_2 | 1975 | 3900 | + | 3.A.1.135.5 |
| NULL(UNKNOWN) | HRGMv2_2881_13 | HRGMv2_2881_13_3 | 4219 | 4512 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2881_13 | HRGMv2_2881_13_4 | 4746 | 5558 | + | CE4 |
| CAZyme | HRGMv2_2881_13 | HRGMv2_2881_13_5 | 5555 | 6235 | + | CE4 |
Gene ID: HRGMv2_2881_13_1
Type: TC
Location: 237 - 1988 (+)
Type: TC
Location: 237 - 1988 (+)
Gene ID: HRGMv2_2881_13_2
Type: TC
Location: 1975 - 3900 (+)
Type: TC
Location: 1975 - 3900 (+)
Gene ID: HRGMv2_2881_13_3
Type:
Location: 4219 - 4512 (-)
Type:
Location: 4219 - 4512 (-)
Gene ID: HRGMv2_2881_13_4
Type: CAZyme
Location: 4746 - 5558 (+)
Type: CAZyme
Location: 4746 - 5558 (+)
Gene ID: HRGMv2_2881_13_5
Type: CAZyme
Location: 5555 - 6235 (+)
Type: CAZyme
Location: 5555 - 6235 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp000437015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.