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Cluster: HRGMv2_2881_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2881_9 HRGMv2_2881_9_1 1 1776 + 3.A.3.23.2
pfam HRGMv2_2881_9 HRGMv2_2881_9_2 1844 3763 - Transket_pyr | Transketolase_C | DXP_synthase_N
CAZyme HRGMv2_2881_9 HRGMv2_2881_9_3 4063 5037 + GT2
NULL(UNKNOWN) HRGMv2_2881_9 HRGMv2_2881_9_4 5058 6338 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2881_9 HRGMv2_2881_9_5 6410 7489 + EpsG
CAZyme HRGMv2_2881_9 HRGMv2_2881_9_6 7489 8709 + GT5
pfam HRGMv2_2881_9 HRGMv2_2881_9_7 8702 10006 + Polysacc_synt | Polysacc_synt_3
pfam HRGMv2_2881_9 HRGMv2_2881_9_8 10068 10901 + LicD
TC HRGMv2_2881_9 HRGMv2_2881_9_9 10963 12009 + 9.B.18.2.1
Gene ID: HRGMv2_2881_9_1
Type: TC
Location: 1 - 1776 (+)
Gene ID: HRGMv2_2881_9_2
Type: pfam
Location: 1844 - 3763 (-)
Gene ID: HRGMv2_2881_9_3
Type: CAZyme
Location: 4063 - 5037 (+)
Gene ID: HRGMv2_2881_9_4
Type:
Location: 5058 - 6338 (+)
Gene ID: HRGMv2_2881_9_5
Type: pfam
Location: 6410 - 7489 (+)
Gene ID: HRGMv2_2881_9_6
Type: CAZyme
Location: 7489 - 8709 (+)
Gene ID: HRGMv2_2881_9_7
Type: pfam
Location: 8702 - 10006 (+)
Gene ID: HRGMv2_2881_9_8
Type: pfam
Location: 10068 - 10901 (+)
Gene ID: HRGMv2_2881_9_9
Type: TC
Location: 10963 - 12009 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-390
→
Species
CAG-390 sp000437015

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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