Cluster: HRGMv2_2881_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2881
- CGC Family ID: CGCFAM_00073
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2881_118 | HRGMv2_2881_118_1 | 1 | 426 | + | GT4 |
| TC | HRGMv2_2881_118 | HRGMv2_2881_118_2 | 457 | 1317 | + | 3.A.1.103.5 |
| TC | HRGMv2_2881_118 | HRGMv2_2881_118_3 | 1326 | 2594 | + | 3.A.1.103.5 |
| pfam | HRGMv2_2881_118 | HRGMv2_2881_118_4 | 2679 | 3065 | + | Glycos_transf_2 |
| pfam | HRGMv2_2881_118 | HRGMv2_2881_118_5 | 3071 | 4129 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_2881_118 | HRGMv2_2881_118_6 | 4134 | 5141 | + | GT2 |
Gene ID: HRGMv2_2881_118_1
Type: CAZyme
Location: 1 - 426 (+)
Type: CAZyme
Location: 1 - 426 (+)
Gene ID: HRGMv2_2881_118_2
Type: TC
Location: 457 - 1317 (+)
Type: TC
Location: 457 - 1317 (+)
Gene ID: HRGMv2_2881_118_3
Type: TC
Location: 1326 - 2594 (+)
Type: TC
Location: 1326 - 2594 (+)
Gene ID: HRGMv2_2881_118_4
Type: pfam
Location: 2679 - 3065 (+)
Type: pfam
Location: 2679 - 3065 (+)
Gene ID: HRGMv2_2881_118_5
Type: pfam
Location: 3071 - 4129 (+)
Type: pfam
Location: 3071 - 4129 (+)
Gene ID: HRGMv2_2881_118_6
Type: CAZyme
Location: 4134 - 5141 (+)
Type: CAZyme
Location: 4134 - 5141 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp000437015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.