Cluster: HRGMv2_2881_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2881
- CGC Family ID: CGCFAM_01873
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2881_102 | HRGMv2_2881_102_1 | 2 | 1060 | + | GT4 |
| pfam | HRGMv2_2881_102 | HRGMv2_2881_102_2 | 1050 | 2162 | + | EpsG |
| CAZyme | HRGMv2_2881_102 | HRGMv2_2881_102_3 | 2163 | 3143 | + | GT2 |
| TC | HRGMv2_2881_102 | HRGMv2_2881_102_4 | 3164 | 4156 | + | 9.B.97.6.2 |
Gene ID: HRGMv2_2881_102_1
Type: CAZyme
Location: 2 - 1060 (+)
Type: CAZyme
Location: 2 - 1060 (+)
Gene ID: HRGMv2_2881_102_2
Type: pfam
Location: 1050 - 2162 (+)
Type: pfam
Location: 1050 - 2162 (+)
Gene ID: HRGMv2_2881_102_3
Type: CAZyme
Location: 2163 - 3143 (+)
Type: CAZyme
Location: 2163 - 3143 (+)
Gene ID: HRGMv2_2881_102_4
Type: TC
Location: 3164 - 4156 (+)
Type: TC
Location: 3164 - 4156 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp000437015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.