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Cluster: HRGMv2_2880_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2880_2 HRGMv2_2880_2_120 115132 116058 - 3.A.1.1.10
TC HRGMv2_2880_2 HRGMv2_2880_2_121 116082 117023 - 3.A.1.1.10
CAZyme HRGMv2_2880_2 HRGMv2_2880_2_122 117686 119038 + GH32
CAZyme HRGMv2_2880_2 HRGMv2_2880_2_123 119074 120423 + GH32
CAZyme HRGMv2_2880_2 HRGMv2_2880_2_124 120497 121849 + GH32
STP HRGMv2_2880_2 HRGMv2_2880_2_125 121885 122880 + PfkB
NULL(UNKNOWN) HRGMv2_2880_2 HRGMv2_2880_2_126 123053 123532 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2880_2 HRGMv2_2880_2_127 123717 124784 - 3.A.1.11.7
TC HRGMv2_2880_2 HRGMv2_2880_2_128 124781 125593 - 3.A.1.11.1
TC HRGMv2_2880_2 HRGMv2_2880_2_129 125813 126691 - 3.A.1.11.1
TC HRGMv2_2880_2 HRGMv2_2880_2_130 126688 127770 - 3.A.1.11.1
Gene ID: HRGMv2_2880_2_120
Type: TC
Location: 115132 - 116058 (-)
Gene ID: HRGMv2_2880_2_121
Type: TC
Location: 116082 - 117023 (-)
Gene ID: HRGMv2_2880_2_122
Type: CAZyme
Location: 117686 - 119038 (+)
Gene ID: HRGMv2_2880_2_123
Type: CAZyme
Location: 119074 - 120423 (+)
Gene ID: HRGMv2_2880_2_124
Type: CAZyme
Location: 120497 - 121849 (+)
Gene ID: HRGMv2_2880_2_125
Type: STP
Location: 121885 - 122880 (+)
Gene ID: HRGMv2_2880_2_126
Type:
Location: 123053 - 123532 (+)
Gene ID: HRGMv2_2880_2_127
Type: TC
Location: 123717 - 124784 (-)
Gene ID: HRGMv2_2880_2_128
Type: TC
Location: 124781 - 125593 (-)
Gene ID: HRGMv2_2880_2_129
Type: TC
Location: 125813 - 126691 (-)
Gene ID: HRGMv2_2880_2_130
Type: TC
Location: 126688 - 127770 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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