Cluster: HRGMv2_2880_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2880
- CGC Family ID: CGCFAM_00762
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2880_1 | HRGMv2_2880_1_216 | 214404 | 215372 | + | 3.A.1.1.10 |
| TC | HRGMv2_2880_1 | HRGMv2_2880_1_217 | 215394 | 216305 | + | 3.A.1.1.9 |
| STP | HRGMv2_2880_1 | HRGMv2_2880_1_218 | 216406 | 218079 | + | SBP_bac_1 |
| pfam | HRGMv2_2880_1 | HRGMv2_2880_1_219 | 218168 | 218896 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_2880_1 | HRGMv2_2880_1_220 | 219258 | 221021 | + | GH2 |
Gene ID: HRGMv2_2880_1_216
Type: TC
Location: 214404 - 215372 (+)
Type: TC
Location: 214404 - 215372 (+)
Gene ID: HRGMv2_2880_1_217
Type: TC
Location: 215394 - 216305 (+)
Type: TC
Location: 215394 - 216305 (+)
Gene ID: HRGMv2_2880_1_218
Type: STP
Location: 216406 - 218079 (+)
Type: STP
Location: 216406 - 218079 (+)
Gene ID: HRGMv2_2880_1_219
Type: pfam
Location: 218168 - 218896 (+)
Type: pfam
Location: 218168 - 218896 (+)
Gene ID: HRGMv2_2880_1_220
Type: CAZyme
Location: 219258 - 221021 (+)
Type: CAZyme
Location: 219258 - 221021 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.