Cluster: HRGMv2_2880_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2880
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2880_34 | HRGMv2_2880_34_10 | 17215 | 18510 | - | GT2 |
| TF | HRGMv2_2880_34 | HRGMv2_2880_34_11 | 19160 | 19684 | - | HTH_AraC | HTH_AraC |
| STP | HRGMv2_2880_34 | HRGMv2_2880_34_12 | 19940 | 21283 | + | Aminotran_1_2 |
| TC | HRGMv2_2880_34 | HRGMv2_2880_34_13 | 21682 | 23403 | + | 1.A.11.2.3 |
| pfam | HRGMv2_2880_34 | HRGMv2_2880_34_14 | 23482 | 24519 | - | SdpI |
| TF | HRGMv2_2880_34 | HRGMv2_2880_34_15 | 24523 | 24786 | - | HTH_5 |
| TC | HRGMv2_2880_34 | HRGMv2_2880_34_16 | 24995 | 25966 | + | 3.A.1.135.6 |
Gene ID: HRGMv2_2880_34_10
Type: CAZyme
Location: 17215 - 18510 (-)
Type: CAZyme
Location: 17215 - 18510 (-)
Gene ID: HRGMv2_2880_34_11
Type: TF
Location: 19160 - 19684 (-)
Type: TF
Location: 19160 - 19684 (-)
Gene ID: HRGMv2_2880_34_12
Type: STP
Location: 19940 - 21283 (+)
Type: STP
Location: 19940 - 21283 (+)
Gene ID: HRGMv2_2880_34_13
Type: TC
Location: 21682 - 23403 (+)
Type: TC
Location: 21682 - 23403 (+)
Gene ID: HRGMv2_2880_34_14
Type: pfam
Location: 23482 - 24519 (-)
Type: pfam
Location: 23482 - 24519 (-)
Gene ID: HRGMv2_2880_34_15
Type: TF
Location: 24523 - 24786 (-)
Type: TF
Location: 24523 - 24786 (-)
Gene ID: HRGMv2_2880_34_16
Type: TC
Location: 24995 - 25966 (+)
Type: TC
Location: 24995 - 25966 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.