Cluster: HRGMv2_2880_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2880
- CGC Family ID: CGCFAM_03952
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2880_34 | HRGMv2_2880_34_1 | 441 | 1835 | - | 2.A.66.1.32 |
| pfam | HRGMv2_2880_34 | HRGMv2_2880_34_2 | 1972 | 2796 | - | AP_endonuc_2 |
| pfam | HRGMv2_2880_34 | HRGMv2_2880_34_3 | 2937 | 3707 | + | PNP_UDP_1 |
| CAZyme | HRGMv2_2880_34 | HRGMv2_2880_34_4 | 3788 | 6865 | - | GT39 |
| CAZyme | HRGMv2_2880_34 | HRGMv2_2880_34_5 | 7030 | 10020 | + | GH2 |
Gene ID: HRGMv2_2880_34_1
Type: TC
Location: 441 - 1835 (-)
Type: TC
Location: 441 - 1835 (-)
Gene ID: HRGMv2_2880_34_2
Type: pfam
Location: 1972 - 2796 (-)
Type: pfam
Location: 1972 - 2796 (-)
Gene ID: HRGMv2_2880_34_3
Type: pfam
Location: 2937 - 3707 (+)
Type: pfam
Location: 2937 - 3707 (+)
Gene ID: HRGMv2_2880_34_4
Type: CAZyme
Location: 3788 - 6865 (-)
Type: CAZyme
Location: 3788 - 6865 (-)
Gene ID: HRGMv2_2880_34_5
Type: CAZyme
Location: 7030 - 10020 (+)
Type: CAZyme
Location: 7030 - 10020 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.