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Cluster: HRGMv2_2880_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2880_14 HRGMv2_2880_14_29 34910 36736 + 3.A.16.1.2
pfam HRGMv2_2880_14 HRGMv2_2880_14_30 36733 37284 + DUF308 | DUF308 | DUF308
CAZyme HRGMv2_2880_14 HRGMv2_2880_14_31 37450 38280 + GT8
NULL(UNKNOWN) HRGMv2_2880_14 HRGMv2_2880_14_32 38443 38700 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2880_14 HRGMv2_2880_14_33 39343 40350 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2880_14 HRGMv2_2880_14_34 40363 41040 + 3.A.1.122.2
TC HRGMv2_2880_14 HRGMv2_2880_14_35 41037 42194 + 3.A.1.122.2
TF HRGMv2_2880_14 HRGMv2_2880_14_36 42371 42748 + Pencillinase_R
peptidase HRGMv2_2880_14 HRGMv2_2880_14_37 42735 43685 + M56.UPW
TC HRGMv2_2880_14 HRGMv2_2880_14_38 43742 44617 + 3.A.1.148.3
Gene ID: HRGMv2_2880_14_29
Type: TC
Location: 34910 - 36736 (+)
Gene ID: HRGMv2_2880_14_30
Type: pfam
Location: 36733 - 37284 (+)
Gene ID: HRGMv2_2880_14_31
Type: CAZyme
Location: 37450 - 38280 (+)
Gene ID: HRGMv2_2880_14_32
Type:
Location: 38443 - 38700 (-)
Gene ID: HRGMv2_2880_14_33
Type:
Location: 39343 - 40350 (+)
Gene ID: HRGMv2_2880_14_34
Type: TC
Location: 40363 - 41040 (+)
Gene ID: HRGMv2_2880_14_35
Type: TC
Location: 41037 - 42194 (+)
Gene ID: HRGMv2_2880_14_36
Type: TF
Location: 42371 - 42748 (+)
Gene ID: HRGMv2_2880_14_37
Type: peptidase
Location: 42735 - 43685 (+)
Gene ID: HRGMv2_2880_14_38
Type: TC
Location: 43742 - 44617 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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