Cluster: HRGMv2_2866_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2866
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2866_10 | HRGMv2_2866_10_29 | 32109 | 33650 | - | GH13_44 |
| TF | HRGMv2_2866_10 | HRGMv2_2866_10_30 | 33923 | 34807 | + | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_2866_10 | HRGMv2_2866_10_31 | 34950 | 35294 | - | Hpt |
| TC | HRGMv2_2866_10 | HRGMv2_2866_10_32 | 35328 | 36863 | - | 8.A.59.4.2 |
| pfam | HRGMv2_2866_10 | HRGMv2_2866_10_33 | 37503 | 39362 | + | FapA | FapA_N |
| TC | HRGMv2_2866_10 | HRGMv2_2866_10_34 | 39395 | 40492 | + | 8.A.59.4.1 |
Gene ID: HRGMv2_2866_10_29
Type: CAZyme
Location: 32109 - 33650 (-)
Type: CAZyme
Location: 32109 - 33650 (-)
Gene ID: HRGMv2_2866_10_30
Type: TF
Location: 33923 - 34807 (+)
Type: TF
Location: 33923 - 34807 (+)
Gene ID: HRGMv2_2866_10_31
Type: pfam
Location: 34950 - 35294 (-)
Type: pfam
Location: 34950 - 35294 (-)
Gene ID: HRGMv2_2866_10_32
Type: TC
Location: 35328 - 36863 (-)
Type: TC
Location: 35328 - 36863 (-)
Gene ID: HRGMv2_2866_10_33
Type: pfam
Location: 37503 - 39362 (+)
Type: pfam
Location: 37503 - 39362 (+)
Gene ID: HRGMv2_2866_10_34
Type: TC
Location: 39395 - 40492 (+)
Type: TC
Location: 39395 - 40492 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.