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Cluster: HRGMv2_2866_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2866_8 HRGMv2_2866_8_3 2539 4350 - 8.A.59.2.2
TC HRGMv2_2866_8 HRGMv2_2866_8_4 4540 5571 + 9.B.34.1.3
pfam HRGMv2_2866_8 HRGMv2_2866_8_5 5593 6138 + CobU
TC HRGMv2_2866_8 HRGMv2_2866_8_6 6154 7215 + 3.A.15.2.1
NULL(UNKNOWN) HRGMv2_2866_8 HRGMv2_2866_8_7 7388 8596 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2866_8 HRGMv2_2866_8_8 8911 9609 + 3.A.1.134.3
pfam HRGMv2_2866_8 HRGMv2_2866_8_9 9624 12599 + FtsX | FtsX
TC HRGMv2_2866_8 HRGMv2_2866_8_10 12710 13267 - 2.A.107.1.2
TC HRGMv2_2866_8 HRGMv2_2866_8_11 13583 14263 - 3.A.1.122.7
NULL(UNKNOWN) HRGMv2_2866_8 HRGMv2_2866_8_12 14264 14833 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2866_8 HRGMv2_2866_8_13 14853 16208 - 3.A.1.122.2
pfam HRGMv2_2866_8 HRGMv2_2866_8_14 16234 18282 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
NULL(UNKNOWN) HRGMv2_2866_8 HRGMv2_2866_8_15 18599 19510 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2866_8 HRGMv2_2866_8_16 19682 20824 + GH5_4
CAZyme HRGMv2_2866_8 HRGMv2_2866_8_17 20958 22298 + GH43_35
Gene ID: HRGMv2_2866_8_3
Type: TC
Location: 2539 - 4350 (-)
Gene ID: HRGMv2_2866_8_4
Type: TC
Location: 4540 - 5571 (+)
Gene ID: HRGMv2_2866_8_5
Type: pfam
Location: 5593 - 6138 (+)
Gene ID: HRGMv2_2866_8_6
Type: TC
Location: 6154 - 7215 (+)
Gene ID: HRGMv2_2866_8_7
Type:
Location: 7388 - 8596 (+)
Gene ID: HRGMv2_2866_8_8
Type: TC
Location: 8911 - 9609 (+)
Gene ID: HRGMv2_2866_8_9
Type: pfam
Location: 9624 - 12599 (+)
Gene ID: HRGMv2_2866_8_10
Type: TC
Location: 12710 - 13267 (-)
Gene ID: HRGMv2_2866_8_11
Type: TC
Location: 13583 - 14263 (-)
Gene ID: HRGMv2_2866_8_12
Type:
Location: 14264 - 14833 (-)
Gene ID: HRGMv2_2866_8_13
Type: TC
Location: 14853 - 16208 (-)
Gene ID: HRGMv2_2866_8_14
Type: pfam
Location: 16234 - 18282 (-)
Gene ID: HRGMv2_2866_8_15
Type:
Location: 18599 - 19510 (-)
Gene ID: HRGMv2_2866_8_16
Type: CAZyme
Location: 19682 - 20824 (+)
Gene ID: HRGMv2_2866_8_17
Type: CAZyme
Location: 20958 - 22298 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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