Cluster: HRGMv2_2866_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2866
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2866_156 | HRGMv2_2866_156_1 | 3 | 923 | - | 3.A.1.3.3 |
| pfam | HRGMv2_2866_156 | HRGMv2_2866_156_2 | 1388 | 1786 | - | TM2 |
| TF | HRGMv2_2866_156 | HRGMv2_2866_156_3 | 1902 | 2225 | + | HTH_3 |
| CAZyme | HRGMv2_2866_156 | HRGMv2_2866_156_4 | 2472 | 4871 | + | GH94 |
Gene ID: HRGMv2_2866_156_1
Type: TC
Location: 3 - 923 (-)
Type: TC
Location: 3 - 923 (-)
Gene ID: HRGMv2_2866_156_2
Type: pfam
Location: 1388 - 1786 (-)
Type: pfam
Location: 1388 - 1786 (-)
Gene ID: HRGMv2_2866_156_3
Type: TF
Location: 1902 - 2225 (+)
Type: TF
Location: 1902 - 2225 (+)
Gene ID: HRGMv2_2866_156_4
Type: CAZyme
Location: 2472 - 4871 (+)
Type: CAZyme
Location: 2472 - 4871 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.